Apple Crumble Cupcakes: The Perfect Fall Dessert You Can’t Resist

Autumn is here, and there’s nothing better than sinking your teeth into a warm, spice‑infused treat. Enter Apple Crumble Cupcakes — a delightful mashup of tender spiced cupcake, juicy apple filling, and a crunchy crumble topping. If you love classic apple crumble desserts, these cupcakes turn that comfort into individual, irresistible bites.

Why You’ll Love These Apple Crumble Cupcakes

  • Texture contrast: Soft, moist cake meets sweet, spiced apple filling, crowned by a buttery crumble that delivers a satisfying crunch.
  • Portion-perfect: Everyone can enjoy a personal-sized treat without the mess of slicing.
  • Seasonal flavor: The warm spices — cinnamon, nutmeg, maybe a hint of cloves — make these cupcakes feel like autumn in your mouth.
  • Versatility: They pair beautifully with a scoop of vanilla ice cream, a drizzle of caramel, or even a light dusting of powdered sugar.

If you enjoy this, you might also like my Pumpkin Spice Cheesecake

Ingredients

For the Crumble Topping

  • 1 cup all‑purpose flour
  • ½ cup packed light brown sugar
  • ½ teaspoon ground cinnamon
  • ¼ teaspoon ground nutmeg
  • ½ cup (1 stick) cold unsalted butter, cut into small cubes

For the Apple Filling

  • 3 medium apples (such as Honeycrisp, Gala, or Fuji), peeled, cored, and diced
  • 2 tablespoons granulated sugar
  • 1 tablespoon lemon juice
  • 1 teaspoon ground cinnamon
  • ¼ teaspoon ground nutmeg
  • 1 tablespoon all‑purpose flour

For the Cupcakes

  • 1½ cups all‑purpose flour
  • 1½ teaspoons baking powder
  • ¼ teaspoon baking soda
  • ¼ teaspoon salt
  • ½ cup (1 stick) unsalted butter, softened
  • ¾ cup granulated sugar
  • 2 large eggs
  • 1 teaspoon vanilla extract
  • ½ cup sour cream or plain yogurt
  • ¼ cup milk

Optional

  • Caramel sauce, for drizzling
  • Powdered sugar, for dusting

Instructions

  1. Prepare the crumble topping
    In a bowl, whisk together flour, brown sugar, cinnamon, and nutmeg. Add the cold, cubed butter and cut it into the dry mixture (using a pastry cutter or fingers) until coarse, small crumbs form. Cover and refrigerate while you assemble the rest.
  2. Make the apple filling
    In another bowl, combine diced apples, granulated sugar, lemon juice, cinnamon, nutmeg, and flour. Stir well to coat. Set aside.
  3. Preheat oven & line muffin tin
    Preheat to 350 °F (175 °C). Line a 12-cup muffin tin with paper liners.
  4. Mix dry ingredients
    Whisk together the flour, baking powder, baking soda, and salt in a medium bowl.
  5. Cream butter & sugar
    In a large bowl, beat softened butter and sugar until light and fluffy (around 3–5 minutes).
  6. Add eggs & vanilla
    Add eggs one at a time, fully incorporating each before adding the next. Stir in the vanilla extract.
  7. Combine wet and dry
    In a small bowl, whisk sour cream (or yogurt) with milk. Then alternately add dry ingredients and the sour cream/milk mixture into the butter‑egg mixture, beginning and ending with the dry. Mix until just combined — avoid overmixing.
  8. Assemble the cupcakes
    • Spoon about 2 tablespoons of batter into each liner.
    • Top with ~2 tablespoons of the apple filling.
    • Sprinkle the crumble topping evenly over each. Use all the crumble.
  9. Bake
    Bake for 20–25 minutes or until a toothpick inserted in the center comes out clean and the crumble is golden brown.
  10. Cool & garnish
    Let the cupcakes cool in the muffin tin for a few minutes, then transfer to a wire rack to cool completely.
    Optionally, drizzle with caramel sauce or dust with powdered sugar before serving.

Tips & Variations

  • Use cold butter in the crumble — this ensures the topping stays crisp instead of melting in.
  • Don’t overmix the batter — overworking the flour will lead to tougher cupcakes.
  • Choose good quality apples — I recommend Honeycrisp, Gala, or Fuji for firmness and flavor.
  • For extra flair, add chopped nuts (pecans or walnuts) into the crumble.
  • Try adding spices like ground ginger or cloves to the apple filling for depth.
  • A cream cheese frosting can elevate the cupcakes into a more decadent dessert.
  • For smaller treats, make mini cupcakes (adjust baking time accordingly).
  • To go gluten‑free, swap in a gluten‑free flour blend.
  • To make them vegan, use vegan butter, plant-based milk, and an egg replacer.

Serving Suggestions

These cupcakes are perfect as is, but you can enhance them:

  • Add a dollop of vanilla ice cream or whipped cream on top.
  • Serve with a side of warm caramel sauce for extra indulgence.
  • Pair with a hot cup of spiced tea or coffee for cozy autumn vibes.

FAQ & Troubleshooting

ProblemPossible CauseFix
Crumble topping becomes soggyButter got too warm or apples released excess moistureUse colder butter and don’t overload the filling
Cupcakes sink in centerUnderbaked or overfilledBake until tester is clean; leave space for rise
Too denseOvermixed batterMix just until ingredients combine
Apple chunks sinkBatter too thin or apples too heavyToss apples lightly in flour before layering

Final Thoughts

Apple Crumble Cupcakes are the ideal treat to capture the spirit of fall in a single bite. They blend warm spices, juicy apples, and a crunchy topping into a dessert that’s as fun to bake as it is to eat. Whether for a family gathering or a cozy evening treat, they’re bound to impress.

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